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SRX9173829: A demultiplexed individual from a multiplexed Genotype-by-sequence data (95 individuals per Illumina Lane) paired-end sequenced on Illumina HiSeq 4000
1 ILLUMINA (Illumina HiSeq 4000) run: 3.5M spots, 310.9M bases, 138.4Mb downloads

Design: see details in Pulido-Santacruz et al. 2018. Morphologically cryptic Amazonian bird species pairs exhibit strong post-zygotic reproductive isolation. Proc. R. Soc. B 285: 20172081
Submitted by: University of Toronto
Study: Hypocnemis ochrogyna and H. striata hybrid zone analysis
show Abstracthide Abstract
Hypocnemis ochrogyna and H. striata hybrid come into geographic contact and form a hybrid zone in between the Rio Teles Pires and Rio Xingu in the headwater regions of these rivers. Here we use genotype by sequencing to sequence thousands of genomic regions and generate a data set of several thousand SNPs. We use these SNPs to study patterns of introgression along the hybrid zone between these species to help us understand how reproductive isolation is accumulating in cryptic Amazonian understory forest birds.
Sample: A demultiplexed individual from a multiplexed Genotype-by-sequence data (95 individuals per Illumina Lane) paired-end sequenced on Illumina HiSeq 4000
SAMN16182207 • SRS7411398 • All experiments • All runs
Library:
Name: Library_MPEG_83706
Instrument: Illumina HiSeq 4000
Strategy: RAD-Seq
Source: GENOMIC
Selection: unspecified
Layout: SINGLE
Runs: 1 run, 3.5M spots, 310.9M bases, 138.4Mb
Run# of Spots# of BasesSizePublished
SRR126941113,454,777310.9M138.4Mb2022-10-31

ID:
11949647

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